Publications

Emerging Concepts and Technologies for the Discovery of Microorganisms Involved in Human Disease

S Bullman, ML Meyerson, AD Kostic • Annual Review of Pathology: Mechanisms of Disease 12 (1)

Association of Dietary Patterns With Risk of Colorectal Cancer Subtypes Classified by Fusobacterium nucleatum in Tumor Tissue

RS Mehta, R Nishihara, Y Cao, M Song, K Mima, ... • JAMA Oncology 3 (7), 921-927

Fusobacterium nucleatum in Colorectal Carcinoma Tissue According to Tumor Location

K Mima, Y Cao, AT Chan, ZR Qian, JA Nowak, Y Masugi, Y Shi, M Song, A da Silva, M Gu, W Li, T Hamada, K Kosumi, A H, L Liu, AD Kostic, M Giannakis, S Bullman, CA Brennan, DA Milner, H Baba, LA Garraway, JA Meyerhardt, WS Garrett, C Huttenhower, M Meyerson, EL Giovannucci, CS Fuchs, R Nishihara, S Ogino • Clinical and Translational Gastroenterology 7, 200

Dysbiosis, inflammation, and response to treatment: a longitudinal study of pediatric subjects with newly diagnosed inflammatory bowel disease

KA Shaw, M Bertha, T Hofmekler, P Chopra, T Vatanen, A Srivatsa, J Prince, A Kumar, C Sauer, ME Zwick, GA Satten, AD Kostic, JG Mulle, RJ Xavier, S Kugathasan • Genome Medicine 8 (1), 75

An integrative view of microbiome-host interactions in inflammatory bowel diseases

M Wlodarska, AD Kostic, RJ Xavier • Cell Host & Microbe 17 (5), 577-591

Fusobacterium nucleatum in colorectal carcinoma tissue and patient prognosis

K Mima, R Nishihara, ZR Qian, Y Cao, Y Sukawa, JA Nowak, J Yang, R Dou, Y Masugi, M Song, AD Kostic, M Giannakis, S Bullman, DA Milner, H Baba, EL Giovannucci, LA Garraway, GJ Freeman, G Dranoff, WS Garrett, C Huttenhower, M Meyerson, JA Meyerhardt, AT Chan, CS Fuchs, S Ogino • Gut 65, 1973-1980

The microbiome in inflammatory bowel disease: current status and the future ahead

AD Kostic, RJ Xavier, D Gevers • Gastroenterology 146 (6), 1489-1499

Human genome-wide RNAi screen identifies an essential role for inositol pyrophosphates in Type-I interferon response

NK Pulloor, S Nair, AD Kostic, P Bist, JD Weaver, AM Riley, R Tyagi, PD Uchil, JD York, SH Snyder, A Garcia-Sastre, BVL Potter, R Lin, SB Shears, RJ Xavier, MN Krishnan • PLoS Pathog 10 (2), e1003981

Prognostically relevant gene signatures of high-grade serous ovarian carcinoma

RGW Verhaak, P Tamayo, JY Yang, D Hubbard, H Zhang, CJ Creighton, S Fereday, M Lawrence, SL Carter, CH Mermel, AD Kostic, D Etemadmoghadam, G Saskena, K Cibulski, S Duraisamy, K Levanon, C Sougnez, A Tsherniak, S Gomez, R Onofrio, S Gabriel, L Chin, N Zhang, PT Spellman, Y Zhang, R Akbani, KA Hoadley, A Kahn, M Köbel, D Huntsman, RA Soslow, A Defazio, MJ Birrer, JW Gray, JN Weinstein, DD Bowtell, R Drapkin, JP Mesirov, G Getz, DA Levine, M Meyerson • The Journal of Clinical Investigation 123 (1), 517-525

Fusobacterium nucleatum potentiates intestinal tumorigenesis and modulates the tumor-immune microenvironment

AD Kostic, E Chun, L Robertson, JN Glickman, CA Gallini, M Michaud, TE Clancy, DC Chung, P Lochhead, GL Hold, EM El-Omar, D Brenner, CS Fuchs, M Meyerson, WS Garrett • Cell Host & Microbe 14 (2), 207-215

Genomic analysis identifies association of Fusobacterium with colorectal carcinoma

AD Kostic, D Gevers, CS Pedamallu, M Michaud, F Duke, AM Earl, AI Ojesina, J Jung, AJ Bass, J Tabernero, Baselga J, C Liu, RA Shivdasani, S Ogino, BW Birren, C Huttenhower, WS Garrett, M Meyerson • Genome Research 22 (2), 292-298

PathSeq: software to identify or discover microbes by deep sequencing of human tissue

AD Kostic, AI Ojesina, CS Pedamallu, J Jung, RG Verhaak, G Getz, M Meyerson • Nature Biotechnology 29 (5), 393-396

The TPR-containing domain within Est1 homologs exhibits species-specific roles in telomerase interaction and telomere length homeostasis

DCF Sealey, AD Kostic, C LeBel, F Pryde, L Harrington • BMC Molecular Biology 12 (1), 1